.. main file for lpedit documentation

Bayesian short course - day 1
=============================================

Day 1 is all about promoting good analysis habits.  We should be able to look back a year from now at this website or at the files you create to fit your own work and simply be able to understand and use them.


.. rubric:: can-we-reproduce-our-own-analyses?

.. code-block:: python 

  def fib(n):
      a,b = 0,1
      while a < n:
          print("%s "%a),
          a,b = b, a+b
      print("\n")
  fib(1000)
  print("\n")


.. code-block:: none 

  ...
  0  1  1  2  3  5  8  13  21  34  55  89  144  233  377  610  987  
  
  
  
   


This example shows by that using the tool :doc:`lpEdit </lpEdit>` we can embed Python or R code into these documents and the code will be executed when the website is created.

Reproducible research
----------------------

.. toctree::
   :maxdepth: 1

   /ReproducibleResearch
   /LiterateProgramming 
   /Latex
   /R
   /Editor
    
Getting started with Sweave
-----------------------------

.. toctree::
   :maxdepth: 1

   /Sweave
   /SweaveExampleWalkthrough

Learning both R and LaTeX with Sweave
---------------------------------------------------------

.. toctree::
   :maxdepth: 1
 
   /LearningR
   /SweavePlots
   /ImportCsvFiles